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CLEC17A C-type lectin domain containing 17A [ Phocoena sinus (vaquita) ]

Gene ID: 116751668, updated on 18-Mar-2024

Summary

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Gene symbol
CLEC17A
Gene description
C-type lectin domain containing 17A
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human all
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Genomic context

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See CLEC17A in Genome Data Viewer
Location:
chromosome: 3
Exon count:
12
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 3 NC_045765.1 (8462815..8476595, complement)

Chromosome 3 - NC_045765.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 333 Neighboring gene adhesion G protein-coupled receptor E3 Neighboring gene NADH:ubiquinone oxidoreductase subunit B7 Neighboring gene trans-2,3-enoyl-CoA reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045765.1 Chromosome 3 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 17, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045765.1 Reference mPhoSin1.pri

    Range
    8462815..8476595 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032627864.1 → XP_032483755.1  C-type lectin domain family 17, member A

    Conserved Domains (1) summary
    cd03590
    Location:202 → 322
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
Nucleotide Protein
Heading Accession and Version

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