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CHMP4A charged multivesicular body protein 4A [ Phocoena sinus (vaquita) ]

Gene ID: 116748515, updated on 18-Mar-2024

Summary

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Gene symbol
CHMP4A
Gene description
charged multivesicular body protein 4A
See related
Ensembl:ENSPSNG00000012171
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human all
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Genomic context

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See CHMP4A in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 2 NC_045764.1 (103726896..103730627, complement)

Chromosome 2 - NC_045764.1Genomic Context describing neighboring genes Neighboring gene importin 4 Neighboring gene transmembrane 9 superfamily member 1 Neighboring gene testis specific serine kinase 4 Neighboring gene magnesium-dependent phosphatase 1 Neighboring gene NEDD8 ubiquitin like modifier Neighboring gene guanosine monophosphate reductase 2 Neighboring gene TERF1 interacting nuclear factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045764.1 Chromosome 2 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle budding from membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 4a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045764.1 Reference mPhoSin1.pri

    Range
    103726896..103730627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032621657.1 → XP_032477548.1  charged multivesicular body protein 4a

    UniProtKB/TrEMBL
    A0A8C9E4A9
    Related
    ENSPSNP00000016669.1, ENSPSNT00000018794.1
    Conserved Domains (1) summary
    pfam03357
    Location:21 → 198
    Snf7
Nucleotide Protein
Heading Accession and Version

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