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LOC116747570 ferritin light chain-like [ Phocoena sinus (vaquita) ]

Gene ID: 116747570, updated on 9-Nov-2023

Summary

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Gene symbol
LOC116747570
Gene description
ferritin light chain-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
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Genomic context

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See LOC116747570 in Genome Data Viewer
Location:
chromosome: X
Exon count:
1
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) X NC_045784.1 (64425844..64426728)

Chromosome X - NC_045784.1Genomic Context describing neighboring genes Neighboring gene ring finger protein, LIM domain interacting Neighboring gene neurite extension and migration factor Neighboring gene regulator of microtubule dynamics protein 1-like Neighboring gene tropomyosin alpha-4 chain-like Neighboring gene tropomyosin alpha-4 chain-like Neighboring gene ATP binding cassette subfamily B member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045784.1 Chromosome X Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferric iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular iron ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular sequestering of iron ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in iron ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ferritin light chain-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045784.1 Reference mPhoSin1.pri

    Range
    64425844..64426728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032619947.1 → XP_032475838.1  ferritin light chain-like

    Conserved Domains (1) summary
    cl00264
    Location:3 → 98
    Ferritin_like; Ferritin-like superfamily of diiron-containing four-helix-bundle proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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