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AGA aspartylglucosaminidase [ Phocoena sinus (vaquita) ]

Gene ID: 116746793, updated on 18-Mar-2024

Summary

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Gene symbol
AGA
Gene description
aspartylglucosaminidase
See related
Ensembl:ENSPSNG00000012318
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See AGA in Genome Data Viewer
Location:
chromosome: 21
Exon count:
9
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 21 NC_045783.1 (4721203..4732183)

Chromosome 21 - NC_045783.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD22 Neighboring gene uncharacterized LOC116746794 Neighboring gene nei like DNA glycosylase 3 Neighboring gene vascular endothelial growth factor C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045783.1 Chromosome 21 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deglycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045783.1 Reference mPhoSin1.pri

    Range
    4721203..4732183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032618507.1 → XP_032474398.1  N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase

    UniProtKB/TrEMBL
    A0A8C9C4E1
    Related
    ENSPSNP00000016746.1, ENSPSNT00000018884.1
    Conserved Domains (1) summary
    cd04513
    Location:30 → 333
    Glycosylasparaginase; Glycosylasparaginase and similar proteins
Nucleotide Protein
Heading Accession and Version

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