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CHMP2A charged multivesicular body protein 2A [ Phocoena sinus (vaquita) ]

Gene ID: 116744815, updated on 18-Mar-2024

Summary

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Gene symbol
CHMP2A
Gene description
charged multivesicular body protein 2A
See related
Ensembl:ENSPSNG00000021652
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See CHMP2A in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 19 NC_045781.1 (153488..156873)

Chromosome 19 - NC_045781.1Genomic Context describing neighboring genes Neighboring gene WW domain-binding protein 4-like Neighboring gene myeloid zinc finger 1 Neighboring gene ubiquitin conjugating enzyme E2 M Neighboring gene tripartite motif containing 28 Neighboring gene zinc finger and BTB domain containing 45

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045781.1 Chromosome 19 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosome transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
charged multivesicular body protein 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045781.1 Reference mPhoSin1.pri

    Range
    153488..156873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032614963.1 → XP_032470854.1  charged multivesicular body protein 2a isoform X1

    Conserved Domains (1) summary
    pfam03357
    Location:100 → 268
    Snf7

  2. XM_032614964.1 → XP_032470855.1  charged multivesicular body protein 2a isoform X2

    UniProtKB/TrEMBL
    A0A8C9ECI5
    Related
    ENSPSNP00000029953.1, ENSPSNT00000033604.1
    Conserved Domains (1) summary
    pfam03357
    Location:17 → 185
    Snf7

RNA

  1. XR_004347143.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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