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KIRREL2 kirre like nephrin family adhesion molecule 2 [ Phocoena sinus (vaquita) ]

Gene ID: 116744562, updated on 18-Mar-2024

Summary

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Gene symbol
KIRREL2
Gene description
kirre like nephrin family adhesion molecule 2
See related
Ensembl:ENSPSNG00000022246
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See KIRREL2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 19 NC_045781.1 (15448103..15456346, complement)

Chromosome 19 - NC_045781.1Genomic Context describing neighboring genes Neighboring gene NFKB inhibitor delta Neighboring gene amyloid beta precursor like protein 1 Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene proline dehydrogenase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045781.1 Chromosome 19 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045781.1 Reference mPhoSin1.pri

    Range
    15448103..15456346 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032614456.1 → XP_032470347.1  kin of IRRE-like protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9EEB3
    Conserved Domains (3) summary
    pfam13927
    Location:309 → 374
    Ig_3; Immunoglobulin domain
    cd00096
    Location:395 → 399
    Ig; Ig strand A [structural motif]
    cl11960
    Location:394 → 498
    Ig; Immunoglobulin domain

  2. XM_032614455.1 → XP_032470346.1  kin of IRRE-like protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9EEB3
    Related
    ENSPSNP00000030871.1, ENSPSNT00000034638.1
    Conserved Domains (3) summary
    pfam13927
    Location:309 → 374
    Ig_3; Immunoglobulin domain
    cd00096
    Location:395 → 399
    Ig; Ig strand A [structural motif]
    cl11960
    Location:394 → 498
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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