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MBL2 mannose binding lectin 2 [ Phocoena sinus (vaquita) ]

Gene ID: 116741813, updated on 18-Mar-2024

Summary

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Gene symbol
MBL2
Gene description
mannose binding lectin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See MBL2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 16 NC_045778.1 (44298428..44301744)

Chromosome 16 - NC_045778.1Genomic Context describing neighboring genes Neighboring gene proteasome maturation protein-like Neighboring gene protocadherin related 15 Neighboring gene myeloid leukemia factor 1-like Neighboring gene protein kinase cGMP-dependent 1 Neighboring gene dickkopf WNT signaling pathway inhibitor 1 Neighboring gene cleavage stimulation factor subunit 2 tau variant

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045778.1 Chromosome 16 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mannose-binding protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045778.1 Reference mPhoSin1.pri

    Range
    44298428..44301744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032608891.1 → XP_032464782.1  LOW QUALITY PROTEIN: mannose-binding protein C

    UniProtKB/TrEMBL
    A0A8C9CSM5
    Conserved Domains (1) summary
    cl02432
    Location:135 → 245
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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