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CHAT choline O-acetyltransferase [ Phocoena sinus (vaquita) ]

Gene ID: 116741646, updated on 18-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
Ensembl:ENSPSNG00000015928
Gene type
protein coding
RefSeq status
MODEL
Organism
Phocoena sinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Phocoenidae; Phocoena
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: 16
Exon count:
15
Annotation release Status Assembly Chr Location
100 current mPhoSin1.pri (GCF_008692025.1) 16 NC_045778.1 (38703609..38753913)

Chromosome 16 - NC_045778.1Genomic Context describing neighboring genes Neighboring gene ERCC excision repair 6, chromatin remodeling factor Neighboring gene solute carrier family 18 member A3 Neighboring gene chromosome 16 C10orf53 homolog Neighboring gene oxoglutarate dehydrogenase L

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045778.1 Chromosome 16 Reference mPhoSin1.pri

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phocoena sinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mPhoSin1.pri

Genomic

  1. NC_045778.1 Reference mPhoSin1.pri

    Range
    38703609..38753913
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032608521.1 → XP_032464412.1  LOW QUALITY PROTEIN: choline O-acetyltransferase

    UniProtKB/TrEMBL
    A0A8C9CJ48
    Related
    ENSPSNP00000021997.1, ENSPSNT00000024749.1
    Conserved Domains (1) summary
    pfam00755
    Location:24 → 612
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
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