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hs3st4 heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116735962, updated on 18-Mar-2024

Summary

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Gene symbol
hs3st4
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See hs3st4 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 16 NC_045687.1 (8629656..8716804, complement)

Chromosome 16 - NC_045687.1Genomic Context describing neighboring genes Neighboring gene UNC93-like protein MFSD11 Neighboring gene ubiquitin domain-containing protein UBFD1-like Neighboring gene UNC93-like protein MFSD11 Neighboring gene lysine (K)-specific demethylase 8 Neighboring gene heparan sulfate (glucosamine) 3-O-sulfotransferase 2 Neighboring gene ubiquitin specific peptidase 31

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045687.1 Chromosome 16 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4
Names
heparan sulfate-glucosamine 3-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045687.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    8629656..8716804 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032588147.1 → XP_032444038.1  heparan sulfate glucosamine 3-O-sulfotransferase 4

    Conserved Domains (1) summary
    pfam00685
    Location:151 → 388
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

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