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chst12a carbohydrate (chondroitin 4) sulfotransferase 12a [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116735820, updated on 18-Mar-2024

Summary

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Gene symbol
chst12a
Gene description
carbohydrate (chondroitin 4) sulfotransferase 12a
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
chst12
Orthologs
human zebrafish all
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Genomic context

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See chst12a in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 16 NC_045687.1 (18826602..18837666, complement)

Chromosome 16 - NC_045687.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIF11-B Neighboring gene C1q and TNF related 6a Neighboring gene caspase recruitment domain family, member 11 Neighboring gene adaptor related protein complex 5 subunit zeta 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045687.1 Chromosome 16 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045687.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    18826602..18837666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032587951.1 → XP_032443842.1  carbohydrate sulfotransferase 12

    Conserved Domains (1) summary
    pfam03567
    Location:162 → 407
    Sulfotransfer_2; Sulfotransferase family

  2. XM_032587948.1 → XP_032443839.1  carbohydrate sulfotransferase 12

    Conserved Domains (1) summary
    pfam03567
    Location:162 → 407
    Sulfotransfer_2; Sulfotransferase family

  3. XM_032587950.1 → XP_032443841.1  carbohydrate sulfotransferase 12

    Conserved Domains (1) summary
    pfam03567
    Location:162 → 407
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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