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usta uronyl 2-sulfotransferase a [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116734587, updated on 18-Mar-2024

Summary

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Gene symbol
usta
Gene description
uronyl 2-sulfotransferase a
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
ust
Orthologs
human zebrafish all
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Genomic context

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See usta in Genome Data Viewer
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 15 NC_045686.1 (12184045..12234751)

Chromosome 15 - NC_045686.1Genomic Context describing neighboring genes Neighboring gene syntaxin binding protein 5a (tomosyn) Neighboring gene SAM and SH3 domain containing 1a Neighboring gene solute carrier family 22 member 16 Neighboring gene methyltransferase like 24

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045686.1 Chromosome 15 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uronyl 2-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045686.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    12184045..12234751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032586071.1 → XP_032441962.1  uronyl 2-sulfotransferase isoform X1

    Conserved Domains (1) summary
    pfam03567
    Location:141 → 386
    Sulfotransfer_2; Sulfotransferase family

  2. XM_032586072.1 → XP_032441963.1  uronyl 2-sulfotransferase isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:102 → 347
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein Strain
Heading Accession and Version

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