U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116734482 mitochondrial basic amino acids transporter-like [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116734482, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC116734482
Gene description
mitochondrial basic amino acids transporter-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116734482 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 15 NC_045686.1 (14058168..14067134)

Chromosome 15 - NC_045686.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116734334 Neighboring gene solute carrier family 25 member 47a Neighboring gene mitochondrial basic amino acids transporter-like Neighboring gene vertebrae development associated Neighboring gene synapse differentiation inducing 1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045686.1 Chromosome 15 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045686.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    14058168..14067134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032585912.1 → XP_032441803.1  mitochondrial basic amino acids transporter-like isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:61 → 150
    Mito_carr; Mitochondrial carrier protein

  2. XM_032585911.1 → XP_032441802.1  mitochondrial basic amino acids transporter-like isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:87 → 176
    Mito_carr; Mitochondrial carrier protein

RNA

  1. XR_004342228.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases