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st6gal1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116727860, updated on 12-Sep-2024

Summary

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Gene symbol
st6gal1
Gene description
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See st6gal1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 11 NC_045682.1 (1600713..1633043)

Chromosome 11 - NC_045682.1Genomic Context describing neighboring genes Neighboring gene neutrophil cytosolic factor 1 Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene uncharacterized LOC116727871 Neighboring gene uncharacterized LOC116727869 Neighboring gene gap junction beta-7 protein-like Neighboring gene ubiquitin interaction motif containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045682.1 Chromosome 11 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-galactoside alpha-2,6-sialyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045682.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    1600713..1633043
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032575515.1 → XP_032431406.1  beta-galactoside alpha-2,6-sialyltransferase 1-like

    Conserved Domains (1) summary
    pfam00777
    Location:252 → 466
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein Strain
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