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b3gnt5a UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116726057, updated on 2-May-2024

Summary

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Gene symbol
b3gnt5a
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5a
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See b3gnt5a in Genome Data Viewer
Location:
chromosome: 9
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 9 NC_045680.1 (28562599..28571056)

Chromosome 9 - NC_045680.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116726070 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene uncharacterized LOC116726074 Neighboring gene uncharacterized LOC116726073 Neighboring gene replication factor C (activator 1) 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045680.1 Chromosome 9 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045680.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    28562599..28571056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032572560.1 → XP_032428451.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

    Conserved Domains (1) summary
    cl21608
    Location:107 → 305
    Galactosyl_T; Galactosyltransferase

  2. XM_032572558.1 → XP_032428449.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

    Conserved Domains (1) summary
    cl21608
    Location:107 → 305
    Galactosyl_T; Galactosyltransferase

  3. XM_032572561.1 → XP_032428452.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like

    Conserved Domains (1) summary
    cl21608
    Location:107 → 305
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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