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LOC116725912 torsin-1A-interacting protein 2-like [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116725912, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116725912
Gene description
torsin-1A-interacting protein 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC116725912 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 9 NC_045680.1 (16831241..16834764, complement)

Chromosome 9 - NC_045680.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 1-like Neighboring gene pneumococcal serine-rich repeat protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045680.1 Chromosome 9 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045680.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    16831241..16834764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032572320.1 → XP_032428211.1  torsin-1A-interacting protein 2-like isoform X3

    Conserved Domains (1) summary
    pfam05609
    Location:9 → 359
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_032572323.1 → XP_032428214.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (1) summary
    pfam05609
    Location:113 → 350
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_032572321.1 → XP_032428212.1  torsin-1A-interacting protein 2-like isoform X4

    Conserved Domains (1) summary
    pfam05609
    Location:2 → 354
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_032572319.1 → XP_032428210.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:38 → 417
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_032572317.1 → XP_032428208.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:15 → 421
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  6. XM_032572322.1 → XP_032428213.1  torsin-1A-interacting protein 2-like isoform X4

    Conserved Domains (1) summary
    pfam05609
    Location:2 → 354
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  7. XM_032572324.1 → XP_032428215.1  torsin-1A-interacting protein 2-like isoform X5

    Conserved Domains (1) summary
    pfam05609
    Location:113 → 350
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  8. XM_032572318.1 → XP_032428209.1  torsin-1A-interacting protein 2-like isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:15 → 421
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein Strain
Heading Accession and Version

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