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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116724208, updated on 18-Mar-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 1 NC_045672.1 (5699001..5708728)

Chromosome 1 - NC_045672.1Genomic Context describing neighboring genes Neighboring gene selenophosphate synthetase 3 Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene cilia and flagella associated protein 126 Neighboring gene cyclin Q

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045672.1 Chromosome 1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045672.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    5699001..5708728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032569707.1 → XP_032425598.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

    Conserved Domains (1) summary
    cl04660
    Location:66 → 313
    PGAP4-like; Post-GPI attachment to proteins factor 4 and similar proteins

  2. XM_032569720.1 → XP_032425611.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

    Conserved Domains (1) summary
    cl04660
    Location:66 → 313
    PGAP4-like; Post-GPI attachment to proteins factor 4 and similar proteins

  3. XM_032569714.1 → XP_032425605.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

    Conserved Domains (1) summary
    cl04660
    Location:66 → 313
    PGAP4-like; Post-GPI attachment to proteins factor 4 and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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