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dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116723871, updated on 18-Mar-2024

Summary

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Gene symbol
dpm1
Gene description
dolichyl-phosphate mannosyltransferase subunit 1, catalytic
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See dpm1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 1 NC_045672.1 (4546066..4552045)

Chromosome 1 - NC_045672.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member C2 Neighboring gene TATA-box binding protein associated factor 13 Neighboring gene activity-dependent neuroprotector homeobox b Neighboring gene par-6 partitioning defective 6 homolog beta (C. elegans)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045672.1 Chromosome 1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045672.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    4546066..4552045
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032569064.1 → XP_032424955.1  dolichol-phosphate mannosyltransferase subunit 1

    Conserved Domains (1) summary
    PLN02726
    Location:8 → 250
    PLN02726; dolichyl-phosphate beta-D-mannosyltransferase
Nucleotide Protein Strain
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