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acsf3 acyl-CoA synthetase family member 3 [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116718898, updated on 18-Mar-2024

Summary

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Gene symbol
acsf3
Gene description
acyl-CoA synthetase family member 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See acsf3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 4 NC_045675.1 (20342742..20373666, complement)

Chromosome 4 - NC_045675.1Genomic Context describing neighboring genes Neighboring gene SPG7 matrix AAA peptidase subunit, paraplegin Neighboring gene cadherin 15, type 1, M-cadherin (myotubule) Neighboring gene CBFA2/RUNX1 partner transcriptional co-repressor 3 Neighboring gene PABPN1 like, cytoplasmic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045675.1 Chromosome 4 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables medium-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malonate--CoA ligase ACSF3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045675.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    20342742..20373666 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032561177.1 → XP_032417068.1  malonate--CoA ligase ACSF3, mitochondrial

    Conserved Domains (1) summary
    cd05941
    Location:73 → 585
    MCS; Malonyl-CoA synthetase (MCS)
Nucleotide Protein Strain
Heading Accession and Version

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