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mgat1a alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116716992, updated on 12-Sep-2024

Summary

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Gene symbol
mgat1a
Gene description
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase a
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Also known as
mgat1
Orthologs
zebrafish all
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Genomic context

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See mgat1a in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 3 NC_045674.1 (1501048..1505657)

Chromosome 3 - NC_045674.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116716996 Neighboring gene ring finger protein 183 Neighboring gene SH3-binding domain protein 5-like, a Neighboring gene uncharacterized LOC116716998 Neighboring gene gamma-aminobutyric acid (GABA) B receptor, 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045674.1 Chromosome 3 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045674.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    1501048..1505657
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032558040.1 → XP_032413931.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    cl11394
    Location:12 → 439
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_032558041.1 → XP_032413932.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    cl11394
    Location:12 → 439
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_032558043.1 → XP_032413934.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    cl11394
    Location:12 → 439
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_032558042.1 → XP_032413933.1  alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase

    Conserved Domains (1) summary
    cl11394
    Location:12 → 439
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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