U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC116716570 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116716570, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC116716570
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC116716570 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) Unplaced Scaffold NW_022587646.1 (191711..195613, complement)

NW_022587646.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial-like Neighboring gene alpha-soluble NSF attachment protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_022587646 Unplaced Scaffold Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NW_022587646.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    191711..195613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032557408.1 → XP_032413299.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    Conserved Domains (1) summary
    cl21608
    Location:159 → 350
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases