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hs3st1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1 [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116714700, updated on 18-Mar-2024

Summary

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Gene symbol
hs3st1
Gene description
heparan sulfate (glucosamine) 3-O-sulfotransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See hs3st1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 23 NC_045694.1 (11495076..11497781, complement)

Chromosome 23 - NC_045694.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116714431 Neighboring gene cytokine dependent hematopoietic cell linker Neighboring gene RAB28, member RAS oncogene family Neighboring gene NK3 homeobox 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045694.1 Chromosome 23 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1
Names
heparan sulfate-glucosamine 3-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045694.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    11495076..11497781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032555420.1 → XP_032411311.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:53 → 290
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_032555421.1 → XP_032411312.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    Conserved Domains (1) summary
    pfam00685
    Location:53 → 290
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein Strain
Heading Accession and Version

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