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LOC116710097 SRSF protein kinase 2-like [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116710097, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116710097
Gene description
SRSF protein kinase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
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Genomic context

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See LOC116710097 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 20 NC_045691.1 (25080133..25089521, complement)

Chromosome 20 - NC_045691.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 1 Neighboring gene catechol-O-methyltransferase b Neighboring gene coiled-coil domain containing 120b Neighboring gene uncharacterized LOC116710099 Neighboring gene methyl-CpG binding domain protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045691.1 Chromosome 20 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SRSF protein kinase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045691.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    25080133..25089521 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032548921.1 → XP_032404812.1  SRSF protein kinase 2-like isoform X1

    Conserved Domains (1) summary
    cl21453
    Location:76 → 589
    PKc_like; Protein Kinases, catalytic domain

  2. XM_032548922.1 → XP_032404813.1  SRSF protein kinase 2-like isoform X2

    Conserved Domains (1) summary
    cl21453
    Location:2 → 468
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein Strain
Heading Accession and Version

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