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eogt EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase [ Xiphophorus hellerii (green swordtail) ]

Gene ID: 116710007, updated on 18-Mar-2024

Summary

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Gene symbol
eogt
Gene description
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus hellerii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
human zebrafish all
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Genomic context

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See eogt in Genome Data Viewer
Location:
chromosome: 20
Exon count:
16
Annotation release Status Assembly Chr Location
100 current Xiphophorus_hellerii-4.1 (GCF_003331165.1) 20 NC_045691.1 (27093936..27112800)

Chromosome 20 - NC_045691.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene ubiquitin-like modifier activating enzyme 3 Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene TATA element modulatory factor 1 Neighboring gene TAFA chemokine like family member 4b Neighboring gene chemokine-like protein TAFA-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045691.1 Chromosome 20 Reference Xiphophorus_hellerii-4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase
Names
EGF domain specific O-linked N-acetylglucosamine transferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus hellerii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xiphophorus_hellerii-4.1 Primary Assembly

Genomic

  1. NC_045691.1 Reference Xiphophorus_hellerii-4.1 Primary Assembly

    Range
    27093936..27112800
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032548777.1 → XP_032404668.1  EGF domain-specific O-linked N-acetylglucosamine transferase

    Conserved Domains (1) summary
    pfam04577
    Location:243 → 466
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein Strain
Heading Accession and Version

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