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med23 mediator complex subunit 23 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116706351, updated on 18-Mar-2024

Summary

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Gene symbol
med23
Gene description
mediator complex subunit 23
Locus tag
FQN60_015723
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See med23 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
32
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 18 NC_045750.1 (15544368..15563144, complement)

Chromosome 18 - NC_045750.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116706587 Neighboring gene A-kinase anchoring protein 7 Neighboring gene uncharacterized LOC116706083 Neighboring gene interleukin 20 receptor, alpha Neighboring gene EH-domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045750.1 Chromosome 18 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045750.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    15544368..15563144 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032543124.1 → XP_032399015.1  mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A5J5CNC5
    Conserved Domains (1) summary
    pfam11573
    Location:5 → 1319
    Med23; Mediator complex subunit 23

RNA

  1. XR_004336211.1 RNA Sequence

  2. XR_004336210.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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