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plcb4 phospholipase C beta 4 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116706250, updated on 14-Dec-2023

Summary

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Gene symbol
plcb4
Gene description
phospholipase C beta 4
Locus tag
FQN60_015921
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
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Genomic context

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See plcb4 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
41
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 18 NC_045750.1 (24916373..24998850)

Chromosome 18 - NC_045750.1Genomic Context describing neighboring genes Neighboring gene phospholipase C beta 1-like Neighboring gene bone morphogenetic protein 2b Neighboring gene uncharacterized LOC116706258 Neighboring gene uncharacterized LOC116706261 Neighboring gene lysosomal associated membrane protein family member 5 Neighboring gene p21 protein (Cdc42/Rac)-activated kinase 5 Neighboring gene mitogen-activated protein kinase-binding protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045750.1 Chromosome 18 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045750.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    24916373..24998850
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032542977.1 → XP_032398868.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4

    UniProtKB/TrEMBL
    A0A5J5CS49
    Conserved Domains (6) summary
    PTZ00121
    Location:939 → 1223
    PTZ00121; MAEBL; Provisional
    cd08591
    Location:311 → 717
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    PLN02230
    Location:271 → 852
    PLN02230; phosphoinositide phospholipase C 4
    cd13361
    Location:17 → 142
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16211
    Location:147 → 299
    EFh_PI-PLCbeta4; EF-hand motif found in phosphoinositide phospholipase C beta 4 (PI-PLC-beta4)
    pfam06631
    Location:965 → 1006
    DUF1154; Protein of unknown function (DUF1154)
Nucleotide Protein
Heading Accession and Version

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