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slc25a29 solute carrier family 25 member 29 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116706216, updated on 25-Sep-2024

Summary

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Gene symbol
slc25a29
Gene description
solute carrier family 25 member 29
Locus tag
FQN60_015755
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See slc25a29 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 18 NC_045750.1 (16458023..16465118, complement)

Chromosome 18 - NC_045750.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116706215 Neighboring gene vertebrae development associated Neighboring gene uncharacterized LOC116706219 Neighboring gene uncharacterized LOC116706220 Neighboring gene solute carrier family 25 member 47a Neighboring gene thyroxine 5-deiodinase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045750.1 Chromosome 18 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045750.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    16458023..16465118 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032542917.1 → XP_032398808.1  mitochondrial basic amino acids transporter-like

    UniProtKB/TrEMBL
    A0A5J5CQR2
    Conserved Domains (1) summary
    pfam00153
    Location:87 → 182
    Mito_carr; Mitochondrial carrier protein

  2. XM_032542918.1 → XP_032398809.1  mitochondrial basic amino acids transporter-like

    UniProtKB/TrEMBL
    A0A5J5CQR2
    Conserved Domains (1) summary
    pfam00153
    Location:87 → 182
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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