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alg3 ALG3 alpha-1,3- mannosyltransferase [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116699187, updated on 18-Mar-2024

Summary

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Gene symbol
alg3
Gene description
ALG3 alpha-1,3- mannosyltransferase
Locus tag
FQN60_016173
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See alg3 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 12 NC_045744.1 (4269485..4278875, complement)

Chromosome 12 - NC_045744.1Genomic Context describing neighboring genes Neighboring gene serine protease 56 Neighboring gene von Willebrand factor A domain containing 5B2 Neighboring gene mitochondrial E3 ubiquitin protein ligase 2 Neighboring gene calcium/calmodulin-dependent protein kinase II inhibitor 1a Neighboring gene endothelin converting enzyme 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045744.1 Chromosome 12 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045744.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    4269485..4278875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032531659.1 → XP_032387550.1  LOW QUALITY PROTEIN: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase

    Conserved Domains (1) summary
    pfam05208
    Location:68 → 427
    ALG3; ALG3 protein
Nucleotide Protein
Heading Accession and Version

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