U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pde9aa phosphodiesterase 9aa [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116698345, updated on 18-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
pde9aa
Gene description
phosphodiesterase 9aa
Locus tag
FQN60_001657
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Also known as
pde9a
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See pde9aa in Genome Data Viewer
Location:
chromosome: 11
Exon count:
19
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 11 NC_045743.1 (23911443..24039237, complement)

Chromosome 11 - NC_045743.1Genomic Context describing neighboring genes Neighboring gene fibrous sheath CABYR-binding protein-like Neighboring gene WD repeat domain 4 Neighboring gene solute carrier family 37 member 1 Neighboring gene ribosomal RNA processing 1B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045743.1 Chromosome 11 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
Names
phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045743.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    23911443..24039237 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032530261.1 → XP_032386152.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    Conserved Domains (1) summary
    pfam00233
    Location:185 → 415
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

RNA

  1. XR_004334190.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.