U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ano5a anoctamin 5a [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116693863, updated on 18-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ano5a
Gene description
anoctamin 5a
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Also known as
ano5
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ano5a in Genome Data Viewer
Location:
chromosome: 8
Exon count:
24
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 8 NC_045740.1 (6235809..6253817, complement)

Chromosome 8 - NC_045740.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 6a Neighboring gene P2Y purinoceptor 3-like Neighboring gene anoctamin-9-like Neighboring gene single immunoglobulin and toll-interleukin 1 receptor (TIR) domain

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045740.1 Chromosome 8 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
anoctamin-5
Names
anoctamin 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045740.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    6235809..6253817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032523103.1 → XP_032378994.1  anoctamin-5 isoform X5

    Conserved Domains (2) summary
    pfam04547
    Location:277 → 865
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:57 → 274
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  2. XM_032523101.1 → XP_032378992.1  anoctamin-5 isoform X3

    Conserved Domains (2) summary
    pfam04547
    Location:323 → 911
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:103 → 320
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  3. XM_032523100.1 → XP_032378991.1  anoctamin-5 isoform X2

    Conserved Domains (2) summary
    pfam04547
    Location:337 → 923
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:117 → 334
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  4. XM_032523098.1 → XP_032378989.1  anoctamin-5 isoform X1

    Conserved Domains (2) summary
    pfam04547
    Location:337 → 925
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:117 → 334
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  5. XM_032523104.1 → XP_032378995.1  anoctamin-5 isoform X6

    Conserved Domains (2) summary
    pfam04547
    Location:234 → 822
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:14 → 231
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin

  6. XM_032523102.1 → XP_032378993.1  anoctamin-5 isoform X4

    Conserved Domains (2) summary
    pfam04547
    Location:291 → 879
    Anoctamin; Calcium-activated chloride channel
    pfam16178
    Location:71 → 288
    Anoct_dimer; dimerization domain of Ca+-activated chloride-channel, anoctamin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.