U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dgkb diacylglycerol kinase, beta [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116690924, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
dgkb
Gene description
diacylglycerol kinase, beta
Locus tag
FQN60_017264
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See dgkb in Genome Data Viewer
Location:
chromosome: 6
Exon count:
28
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 6 NC_045738.1 (18428915..18521454, complement)

Chromosome 6 - NC_045738.1Genomic Context describing neighboring genes Neighboring gene von Willebrand factor D and EGF domains Neighboring gene ADP-ribosylation factor-like 4aa Neighboring gene ETS variant transcription factor 1 Neighboring gene uncharacterized LOC116690926 Neighboring gene alkylglycerol monooxygenase Neighboring gene mesenchyme homeobox 2a

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_045738.1 Chromosome 6 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
diacylglycerol kinase beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045738.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    18428915..18521454 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032518148.1 → XP_032374039.1  diacylglycerol kinase beta isoform X1

    Conserved Domains (6) summary
    smart00045
    Location:561 → 741
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:419 → 540
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:149 → 218
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:6 → 145
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20845
    Location:234 → 299
    C1_DGKbeta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins
    cd20891
    Location:304 → 362
    C1_DGKbeta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins

  2. XM_032518149.1 → XP_032374040.1  diacylglycerol kinase beta isoform X2

    Conserved Domains (6) summary
    smart00045
    Location:554 → 734
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:412 → 533
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd00051
    Location:142 → 211
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam14513
    Location:6 → 138
    DAG_kinase_N; Diacylglycerol kinase N-terminus
    cd20845
    Location:227 → 292
    C1_DGKbeta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins
    cd20891
    Location:297 → 355
    C1_DGKbeta_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase beta (DAG kinase beta) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.