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tlr2 toll-like receptor 2 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116690724, updated on 18-Mar-2024

Summary

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Gene symbol
tlr2
Gene description
toll-like receptor 2
Locus tag
FQN60_017406
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See tlr2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 6 NC_045738.1 (30410097..30421402)

Chromosome 6 - NC_045738.1Genomic Context describing neighboring genes Neighboring gene fibrinogen beta chain Neighboring gene uncharacterized LOC116690727 Neighboring gene saxiphilin-like Neighboring gene ladderlectin-like Neighboring gene uncharacterized LOC116690730 Neighboring gene uncharacterized LOC116690729 Neighboring gene uncharacterized LOC116690935 Neighboring gene ring finger protein 175

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045738.1 Chromosome 6 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacyl lipopeptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045738.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    30410097..30421402
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032517885.1 → XP_032373776.1  toll-like receptor 2

    UniProtKB/TrEMBL
    A0A5J5DFC0
    Conserved Domains (6) summary
    smart00255
    Location:657 → 812
    TIR; Toll - interleukin 1 - resistance
    PLN00113
    Location:41 → 499
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    COG4886
    Location:356 → 520
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00031
    Location:59 → 80
    LRR_1; leucine-rich repeat [structural motif]
    sd00033
    Location:365 → 393
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:79 → 138
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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