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dgkh diacylglycerol kinase, eta [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116688994, updated on 18-Sep-2024

Summary

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Gene symbol
dgkh
Gene description
diacylglycerol kinase, eta
Locus tag
FQN60_018568
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See dgkh in Genome Data Viewer
Location:
chromosome: 5
Exon count:
30
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 5 NC_045737.1 (36740377..36808227, complement)

Chromosome 5 - NC_045737.1Genomic Context describing neighboring genes Neighboring gene TNF superfamily member 11 Neighboring gene A kinase (PRKA) anchor protein 11 Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene uncharacterized LOC116688996 Neighboring gene uncharacterized LOC116688997 Neighboring gene coagulation factor V Neighboring gene regulator of cell cycle

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045737.1 Chromosome 5 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: diacylglycerol kinase eta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045737.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    36740377..36808227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032515260.1 → XP_032371151.1  LOW QUALITY PROTEIN: diacylglycerol kinase eta

    Conserved Domains (6) summary
    cd09507
    Location:1243 → 1306
    SAM_DGK-delta-eta; SAM domain of diacylglycerol kinase delta and eta subunits
    smart00045
    Location:867 → 1024
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:414 → 536
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    cd13274
    Location:97 → 246
    PH_DGK_type2; Type 2 Diacylglycerol kinase Pleckstrin homology (PH) domain
    cd20848
    Location:230 → 315
    C1_DGKeta_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase eta (DAG kinase eta) and similar proteins
    cl00040
    Location:330 → 383
    C1; protein kinase C conserved region 1 (C1 domain) superfamily
Nucleotide Protein
Heading Accession and Version

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