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sgcg sarcoglycan, gamma [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116680063, updated on 18-Mar-2024

Summary

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Gene symbol
sgcg
Gene description
sarcoglycan, gamma
Locus tag
FQN60_004720
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 3 NC_045735.1 (10776703..10799164)

Chromosome 3 - NC_045735.1Genomic Context describing neighboring genes Neighboring gene clathrin heavy chain 1 Neighboring gene cilia and flagella associated protein 45 Neighboring gene solute carrier family 37 member 4a Neighboring gene trafficking protein particle complex subunit 4 Neighboring gene ribosomal protein S25 Neighboring gene sacsin molecular chaperone Neighboring gene tumor necrosis factor receptor superfamily, member 19

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045735.1 Chromosome 3 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045735.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    10776703..10799164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032509406.1 → XP_032365297.1  gamma-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_032509408.1 → XP_032365299.1  gamma-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_032509407.1 → XP_032365298.1  gamma-sarcoglycan

    Conserved Domains (1) summary
    pfam04790
    Location:25 → 279
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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