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mmadhcb metabolism of cobalamin associated Db [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116678808, updated on 18-Mar-2024

Summary

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Gene symbol
mmadhcb
Gene description
metabolism of cobalamin associated Db
Locus tag
FQN60_000105
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Also known as
mmadhc
Orthologs
human zebrafish all
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Genomic context

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See mmadhcb in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) Unplaced Scaffold NW_022603568.1 (29786..48674, complement)

NW_022603568.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022603568 Unplaced Scaffold Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonic aciduria and homocystinuria type D protein, mitochondrial
Names
metabolism of cobalamin associated D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NW_022603568.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    29786..48674 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032508525.1 → XP_032364416.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A5J5C9G9
    Conserved Domains (1) summary
    pfam10229
    Location:42 → 303
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_032508524.1 → XP_032364415.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A5J5C9G9
    Conserved Domains (1) summary
    pfam10229
    Location:42 → 305
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_032508526.1 → XP_032364417.1  methylmalonic aciduria and homocystinuria type D protein, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A5J5C9G9
    Conserved Domains (1) summary
    pfam10229
    Location:24 → 287
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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