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zbtb44 zinc finger and BTB domain containing 44 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116675860, updated on 18-Mar-2024

Summary

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Gene symbol
zbtb44
Gene description
zinc finger and BTB domain containing 44
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See zbtb44 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 3 NC_045735.1 (3948137..3977491)

Chromosome 3 - NC_045735.1Genomic Context describing neighboring genes Neighboring gene sorting nexin 19b Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15 Neighboring gene uncharacterized LOC116675928 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene chromosome 3 C11orf53 homolog Neighboring gene uncharacterized LOC116683720 Neighboring gene lnc RNA pou2af1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045735.1 Chromosome 3 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045735.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    3948137..3977491
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032507397.1 → XP_032363288.1  zinc finger and BTB domain-containing protein 44 isoform X3

    Conserved Domains (6) summary
    COG5048
    Location:231 → 295
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:135 → 295
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:247 → 267
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:335 → 357
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:333 → 354
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:259 → 284
    zf-H2C2_2; Zinc-finger double domain

  2. XM_032507395.1 → XP_032363286.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Conserved Domains (6) summary
    COG5048
    Location:397 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:311 → 461
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:413 → 433
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:501 → 523
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:425 → 450
    zf-H2C2_2; Zinc-finger double domain

  3. XM_032507398.1 → XP_032363289.1  zinc finger and BTB domain-containing protein 44 isoform X4

    Conserved Domains (5) summary
    COG5048
    Location:407 → 471
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:311 → 471
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:423 → 443
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:435 → 460
    zf-H2C2_2; Zinc-finger double domain

  4. XM_032507400.1 → XP_032363291.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Conserved Domains (5) summary
    COG5048
    Location:397 → 461
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:311 → 461
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:413 → 433
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:425 → 450
    zf-H2C2_2; Zinc-finger double domain

  5. XM_032507401.1 → XP_032363292.1  zinc finger and BTB domain-containing protein 44 isoform X6

    Conserved Domains (4) summary
    COG5048
    Location:50 → 114
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:66 → 86
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:154 → 176
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:78 → 103
    zf-H2C2_2; Zinc-finger double domain

  6. XM_032507402.1 → XP_032363293.1  zinc finger and BTB domain-containing protein 44 isoform X7

    Conserved Domains (4) summary
    COG5048
    Location:40 → 104
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:56 → 76
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:144 → 166
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:68 → 93
    zf-H2C2_2; Zinc-finger double domain

  7. XM_032507389.1 → XP_032363280.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Conserved Domains (6) summary
    COG5048
    Location:407 → 471
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:311 → 471
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:423 → 443
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:511 → 533
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:12 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam13465
    Location:435 → 460
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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