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cog5 component of oligomeric golgi complex 5 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116673245, updated on 18-Mar-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
Locus tag
FQN60_005966
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
22
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 23 NC_045755.1 (21620853..21703321, complement)

Chromosome 23 - NC_045755.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain-containing family A member 5-like Neighboring gene uncharacterized LOC116673240 Neighboring gene zinc finger protein aebp2-like Neighboring gene NADH:ubiquinone oxidoreductase subunit A5 Neighboring gene G-protein coupled receptor 22-like Neighboring gene E3 ubiquitin-protein ligase TRIM21-like Neighboring gene deoxyhypusine synthase-like Neighboring gene uncharacterized LOC116673160

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045755.1 Chromosome 23 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045755.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    21620853..21703321 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032505432.1 → XP_032361323.1  conserved oligomeric Golgi complex subunit 5

    Conserved Domains (1) summary
    pfam10392
    Location:20 → 142
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
Heading Accession and Version

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