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chst15 carbohydrate sulfotransferase 15 [ Etheostoma spectabile (orangethroat darter) ]

Gene ID: 116670763, updated on 14-Dec-2023

Summary

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Gene symbol
chst15
Gene description
carbohydrate sulfotransferase 15
Locus tag
FQN60_003012
Gene type
protein coding
RefSeq status
MODEL
Organism
Etheostoma spectabile
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Percoidei; Percidae; Etheostomatinae; Etheostoma
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Genomic context

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See chst15 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
100 current UIUC_Espe_1.0 (GCF_008692095.1) 21 NC_045753.1 (15743493..15787224)

Chromosome 21 - NC_045753.1Genomic Context describing neighboring genes Neighboring gene ornithine aminotransferase Neighboring gene uncharacterized LOC116670811 Neighboring gene carboxypeptidase X (M14 family), member 2 Neighboring gene G protein-coupled receptor 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045753.1 Chromosome 21 Reference UIUC_Espe_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hexose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Etheostoma spectabile Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UIUC_Espe_1.0 Primary Assembly

Genomic

  1. NC_045753.1 Reference UIUC_Espe_1.0 Primary Assembly

    Range
    15743493..15787224
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032501424.1 → XP_032357315.1  carbohydrate sulfotransferase 15

    UniProtKB/TrEMBL
    A0A5J5CNC7
    Conserved Domains (1) summary
    cl21551
    Location:222 → 481
    Sulfotransfer_3; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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