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LOC116607440 carbohydrate sulfotransferase 14 [ Nematostella vectensis (starlet sea anemone) ]

Gene ID: 116607440, updated on 26-Jun-2024

Summary

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Gene symbol
LOC116607440
Gene description
carbohydrate sulfotransferase 14
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematostella vectensis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella
Also known as
NVE17782
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Genomic context

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See LOC116607440 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
4
Annotation release Status Assembly Chr Location
101 current jaNemVect1.1 (GCF_932526225.1) 14 NC_064047.1 (373280..395190, complement)
100 previous assembly ASM20922v1 (GCF_000209225.1) Unplaced Scaffold NW_001833757.1 (67802..70282)

Chromosome 14 - NC_064047.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor IIB-1-like Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene DUF21 domain-containing protein At2g14520 Neighboring gene GPN-loop GTPase 2 Neighboring gene collagen alpha-1(XII) chain Neighboring gene uncharacterized LOC5500775

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematostella vectensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference jaNemVect1.1

Genomic

  1. NC_064047.1 Reference jaNemVect1.1

    Range
    373280..395190 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048721548.1 → XP_048577505.1  carbohydrate sulfotransferase 14

Nucleotide Protein
Heading Accession and Version

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