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PAK1 p21 (RAC1) activated kinase 1 [ Aythya fuligula (tufted duck) ]

Gene ID: 116492966, updated on 25-Jun-2024

Summary

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Gene symbol
PAK1
Gene description
p21 (RAC1) activated kinase 1
See related
EnsemblRapid:ENSAFUG00000012819
Gene type
protein coding
RefSeq status
MODEL
Organism
Aythya fuligula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya
Orthologs
human mouse all
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Genomic context

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See PAK1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
100 current bAytFul2.pri (GCF_009819795.1) 1 NC_045559.1 (203610234..203675938)

Chromosome 1 - NC_045559.1Genomic Context describing neighboring genes Neighboring gene chloride nucleotide-sensitive channel 1A Neighboring gene aquaporin 11 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 4 Neighboring gene myosin VIIA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045559.1 Chromosome 1 Reference bAytFul2.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PAK 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aythya fuligula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAytFul2.pri Primary Assembly

Genomic

  1. NC_045559.1 Reference bAytFul2.pri Primary Assembly

    Range
    203610234..203675938
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032194022.1 → XP_032049913.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A6J3DKQ2
    Conserved Domains (2) summary
    cd06654
    Location:248 → 543
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1
    pfam00786
    Location:74 → 132
    PBD; P21-Rho-binding domain

  2. XM_032194031.1 → XP_032049922.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A6J3DKQ2
    Related
    ENSAFUP00000017049.1, ENSAFUT00000021550.1
    Conserved Domains (2) summary
    cd06654
    Location:248 → 543
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1
    pfam00786
    Location:74 → 132
    PBD; P21-Rho-binding domain
Nucleotide Protein
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