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LOC116492139 torsin-1A-interacting protein 2-like [ Aythya fuligula (tufted duck) ]

Gene ID: 116492139, updated on 25-Jun-2024

Summary

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Gene symbol
LOC116492139
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSAFUG00000000455
Gene type
protein coding
RefSeq status
MODEL
Organism
Aythya fuligula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya
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Genomic context

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See LOC116492139 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
100 current bAytFul2.pri (GCF_009819795.1) 8 NC_045566.1 (20971266..20980398, complement)

Chromosome 8 - NC_045566.1Genomic Context describing neighboring genes Neighboring gene ADAMTS-like protein 2 Neighboring gene family with sequence similarity 163 member A Neighboring gene torsin-1A-interacting protein 1-like Neighboring gene centrosomal protein 350

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045566.1 Chromosome 8 Reference bAytFul2.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aythya fuligula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAytFul2.pri Primary Assembly

Genomic

  1. NC_045566.1 Reference bAytFul2.pri Primary Assembly

    Range
    20971266..20980398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032192639.1 → XP_032048530.1  torsin-1A-interacting protein 2-like

    UniProtKB/TrEMBL
    A0A6J3DEF3
    Related
    ENSAFUP00000000650.1, ENSAFUT00000000684.1
    Conserved Domains (2) summary
    PTZ00121
    Location:17 → 425
    PTZ00121; MAEBL; Provisional
    pfam05609
    Location:248 → 699
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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