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ITGB8 integrin subunit beta 8 [ Aythya fuligula (tufted duck) ]

Gene ID: 116486140, updated on 25-Jun-2024

Summary

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Gene symbol
ITGB8
Gene description
integrin subunit beta 8
See related
EnsemblRapid:ENSAFUG00000009773
Gene type
protein coding
RefSeq status
MODEL
Organism
Aythya fuligula
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Aythyinae; Aythya
Orthologs
human mouse all
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Genomic context

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See ITGB8 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
100 current bAytFul2.pri (GCF_009819795.1) 2 NC_045560.1 (32917663..32964273)

Chromosome 2 - NC_045560.1Genomic Context describing neighboring genes Neighboring gene very low-density lipoprotein receptor-like Neighboring gene MET transcriptional regulator MACC1 Neighboring gene ATP binding cassette subfamily B member 5 Neighboring gene Sp8 transcription factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045560.1 Chromosome 2 Reference bAytFul2.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Aythya fuligula Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bAytFul2.pri Primary Assembly

Genomic

  1. NC_045560.1 Reference bAytFul2.pri Primary Assembly

    Range
    32917663..32964273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032182146.1 → XP_032038037.1  integrin beta-8 isoform X1

    UniProtKB/TrEMBL
    A0A6J3CMI1
    Related
    ENSAFUP00000013363.1, ENSAFUT00000016362.1
    Conserved Domains (1) summary
    cl00057
    Location:54 → 469
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_032182147.1 → XP_032038038.1  integrin beta-8 isoform X2

    UniProtKB/TrEMBL
    A0A6J3CKU4
    Related
    ENSAFUP00000013344.1, ENSAFUT00000016335.1
    Conserved Domains (1) summary
    cl00057
    Location:54 → 469
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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