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ZBTB44 zinc finger and BTB domain containing 44 [ Hylobates moloch (silvery gibbon) ]

Gene ID: 116477169, updated on 18-Mar-2024

Summary

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Gene symbol
ZBTB44
Gene description
zinc finger and BTB domain containing 44
See related
EnsemblRapid:ENSHMOG00010013750
Gene type
protein coding
RefSeq status
MODEL
Organism
Hylobates moloch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
Orthologs
human mouse all
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Genomic context

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See ZBTB44 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652286.1 (102941022..103029910, complement)
100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454855.1 (102941022..103030344, complement)

NW_026652286.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor like protein 2 Neighboring gene U4 spliceosomal RNA Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like Neighboring gene ATP-dependent RNA helicase DDX18-like Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC131384558 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HMol_V3

Genomic

  1. NW_026652286.1 Reference HMol_V3

    Range
    102941022..103029910 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032167901.2 → XP_032023792.1  zinc finger and BTB domain-containing protein 44 isoform X7

    Conserved Domains (5) summary
    COG5048
    Location:350 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:381 → 403
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  2. XM_032167899.2 → XP_032023790.1  zinc finger and BTB domain-containing protein 44 isoform X3

    Conserved Domains (6) summary
    COG5048
    Location:350 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:471 → 493
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:469 → 490
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  3. XM_032167902.2 → XP_032023793.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Related
    ENSHMOP00010015953.1, ENSHMOT00010020608.1
    Conserved Domains (4) summary
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:399 → 421
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  4. XM_032167900.2 → XP_032023791.1  zinc finger and BTB domain-containing protein 44 isoform X6

    Conserved Domains (4) summary
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:399 → 421
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  5. XM_032167897.2 → XP_032023788.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Related
    ENSHMOP00010015946.1, ENSHMOT00010020601.1
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  6. XM_058446286.1 → XP_058302269.1  zinc finger and BTB domain-containing protein 44 isoform X4

  7. XM_058446285.1 → XP_058302268.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Related
    ENSHMOP00010015952.1, ENSHMOT00010020607.1

RNA

  1. XR_009215529.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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