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SGCG sarcoglycan gamma [ Hylobates moloch (silvery gibbon) ]

Gene ID: 116467156, updated on 18-Mar-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
See related
EnsemblRapid:ENSHMOG00010018054
Gene type
protein coding
RefSeq status
MODEL
Organism
Hylobates moloch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652279.1 (97240164..97457020, complement)
100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454845.1 (97286253..97436362, complement)

NW_026652279.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 19 Neighboring gene uncharacterized LOC116466402 Neighboring gene sacsin molecular chaperone Neighboring gene uncharacterized LOC116467457 Neighboring gene uncharacterized LOC131383389

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HMol_V3

Genomic

  1. NW_026652279.1 Reference HMol_V3

    Range
    97240164..97457020 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058437777.1 → XP_058293760.1  gamma-sarcoglycan isoform X4

  2. XM_032755115.2 → XP_032611006.1  gamma-sarcoglycan isoform X5

    Conserved Domains (1) summary
    pfam04790
    Location:43 → 296
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_058437771.1 → XP_058293754.1  gamma-sarcoglycan isoform X1

  4. XM_058437774.1 → XP_058293757.1  gamma-sarcoglycan isoform X3

    Related
    ENSHMOP00010021333.1, ENSHMOT00010027181.1

  5. XM_058437776.1 → XP_058293759.1  gamma-sarcoglycan isoform X3

  6. XM_058437773.1 → XP_058293756.1  gamma-sarcoglycan isoform X3

  7. XM_058437772.1 → XP_058293755.1  gamma-sarcoglycan isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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