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wb wing blister [ Nomia melanderi (Alkali bee) ]

Gene ID: 116431936, updated on 10-Oct-2024

Summary

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Gene symbol
wb
Gene description
wing blister
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomia melanderi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Halictidae; Nomiinae; Nomia; Acunomia
Orthologs
fruit fly honey bee all
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Genomic context

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Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
100 current USU_Nmel_1.2 (GCF_003710045.1) Unplaced Scaffold NW_022340831.1 (1157487..1255500, complement)

NW_022340831.1Genomic Context describing neighboring genes Neighboring gene glass bottom boat Neighboring gene calmodulin-regulated spectrin-associated protein patronin Neighboring gene uncharacterized LOC116431935 Neighboring gene uncharacterized LOC116431938 Neighboring gene uncharacterized LOC116431979 Neighboring gene uncharacterized LOC116431937

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022340831 Unplaced Scaffold Reference USU_Nmel_1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomia melanderi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USU_Nmel_1.2

Genomic

  1. NW_022340831.1 Reference USU_Nmel_1.2

    Range
    1157487..1255500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031988081.1 → XP_031843941.1  laminin subunit alpha-1 isoform X1

    Conserved Domains (8) summary
    smart00180
    Location:762 → 807
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2590 → 2718
    LamG; Laminin G domain
    cd00055
    Location:1319 → 1353
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2742 → 2899
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:1419 → 1932
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam12785
    Location:1296 → 1415
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1039 → 1174
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:713 → 764
    Laminin_EGF; Laminin EGF domain

  2. XM_031988086.1 → XP_031843946.1  laminin subunit alpha-1 isoform X2

    Conserved Domains (8) summary
    smart00180
    Location:52 → 97
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:1880 → 2008
    LamG; Laminin G domain
    cd00055
    Location:609 → 643
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2032 → 2189
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:709 → 1222
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam12785
    Location:586 → 705
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:329 → 464
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:3 → 54
    Laminin_EGF; Laminin EGF domain

  3. XM_031988083.1 → XP_031843943.1  laminin subunit alpha-1 isoform X1

    Conserved Domains (8) summary
    smart00180
    Location:762 → 807
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2590 → 2718
    LamG; Laminin G domain
    cd00055
    Location:1319 → 1353
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2742 → 2899
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:1419 → 1932
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam12785
    Location:1296 → 1415
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1039 → 1174
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:713 → 764
    Laminin_EGF; Laminin EGF domain

  4. XM_031988085.1 → XP_031843945.1  laminin subunit alpha-1 isoform X1

    Conserved Domains (8) summary
    smart00180
    Location:762 → 807
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2590 → 2718
    LamG; Laminin G domain
    cd00055
    Location:1319 → 1353
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2742 → 2899
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:1419 → 1932
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam12785
    Location:1296 → 1415
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1039 → 1174
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:713 → 764
    Laminin_EGF; Laminin EGF domain

  5. XM_031988084.1 → XP_031843944.1  laminin subunit alpha-1 isoform X1

    Conserved Domains (8) summary
    smart00180
    Location:762 → 807
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2590 → 2718
    LamG; Laminin G domain
    cd00055
    Location:1319 → 1353
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2742 → 2899
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    TIGR04523
    Location:1419 → 1932
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam12785
    Location:1296 → 1415
    VESA1_N; Variant erythrocyte surface antigen-1
    pfam00052
    Location:1039 → 1174
    Laminin_B; Laminin B (Domain IV)
    pfam00053
    Location:713 → 764
    Laminin_EGF; Laminin EGF domain
Nucleotide Protein
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