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GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 116422467, updated on 18-Mar-2024

Summary

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Gene symbol
GALNT13
Gene description
polypeptide N-acetylgalactosaminyltransferase 13
See related
Ensembl:ENSSHAG00000031696
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GALNT13 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 3 NC_045428.1 (422248517..422826294, complement)

Chromosome 3 - NC_045428.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116422466 Neighboring gene potassium inwardly rectifying channel subfamily J member 3 Neighboring gene histone acetyltransferase KAT8-like Neighboring gene E3 ubiquitin-protein ligase TRIM11-like Neighboring gene reprimo, TP53 dependent G2 arrest mediator homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045428.1 Chromosome 3 Reference mSarHar1.11 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045428.1 Reference mSarHar1.11 Primary Assembly

    Range
    422248517..422826294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031960655.1 → XP_031816515.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

    UniProtKB/TrEMBL
    A0A7N4NPG0, A0A7N4NUL3
    Related
    ENSSHAP00000025988.1, ENSSHAT00000041061.1
    Conserved Domains (2) summary
    cd02510
    Location:118 → 418
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:431 → 547
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_031960656.1 → XP_031816516.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

    UniProtKB/TrEMBL
    A0A7N4NUL3
    Conserved Domains (2) summary
    cd02510
    Location:59 → 359
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:372 → 488
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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