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GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 116419572, updated on 18-Mar-2024

Summary

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Gene symbol
GALNT15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSSHAG00000020534
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GALNT15 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 5 NC_045430.1 (253734575..253772133)

Chromosome 5 - NC_045430.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116419568 Neighboring gene uncharacterized LOC116419571 Neighboring gene diphthamide biosynthesis 3 Neighboring gene oxidoreductase NAD binding domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045430.1 Chromosome 5 Reference mSarHar1.11 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045430.1 Reference mSarHar1.11 Primary Assembly

    Range
    253734575..253772133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031940297.1 → XP_031796157.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:202 → 499
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:513 → 600
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_031940296.1 → XP_031796156.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X1

    UniProtKB/TrEMBL
    A0A7N4Q196
    Related
    ENSSHAP00000045485.1, ENSSHAT00000034504.1
    Conserved Domains (2) summary
    cd02510
    Location:202 → 499
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:515 → 639
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
Nucleotide Protein
Heading Accession and Version

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