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LOC116418560 histo-blood group ABO system transferase 2-like [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 116418560, updated on 9-Nov-2023

Summary

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Gene symbol
LOC116418560
Gene description
histo-blood group ABO system transferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
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Genomic context

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See LOC116418560 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 21 NC_045454.1 (22489994..22490816, complement)

Chromosome 21 - NC_045454.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111529905 Neighboring gene uncharacterized LOC111529915 Neighboring gene zinc finger protein 599 Neighboring gene zinc finger protein 181

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_045454.1 Chromosome 21 Reference ASM277652v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histo-blood group ABO system transferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045454.1 Reference ASM277652v3

    Range
    22489994..22490816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031934716.1 → XP_031790576.1  histo-blood group ABO system transferase 2-like

    Conserved Domains (1) summary
    cl11394
    Location:4 → 236
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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