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LOC116407555 oocyte zinc finger protein XlCOF7.1-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 116407555, updated on 26-Jun-2024

Summary

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Official Symbol
LOC116407555provided by Xenbase
Official Full Name
oocyte zinc finger protein XlCOF7.1-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29092691
See related
Ensembl:ENSXETG00000038638
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
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Genomic context

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See LOC116407555 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (3057904..3063161, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene oocyte zinc finger protein XlCOF7.1 Neighboring gene oocyte zinc finger protein XlCOF7.1-like Neighboring gene uncharacterized LOC116407602 Neighboring gene H2A clustered histone 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030685.2 Chromosome 9 Reference UCB_Xtro_10.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
oocyte zinc finger protein XlCOF7.1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    3057904..3063161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031893004.1 → XP_031748864.1  oocyte zinc finger protein XlCOF7.1-like

    UniProtKB/TrEMBL
    A0A803K1E3, A0A8J1ITD9
    Related
    ENSXETP00000114133.1, ENSXETT00000113810.1
    Conserved Domains (4) summary
    COG5048
    Location:316 → 678
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:125 → 426
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:519 → 539
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl02581
    Location:88 → 117
    KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
Nucleotide Protein Strain
Heading Accession and Version

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