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zscan32l zinc finger and SCAN domain containing 32 like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 116406443, updated on 4-Nov-2024

Summary

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Official Symbol
zscan32lprovided by Xenbase
Official Full Name
zinc finger and SCAN domain containing 32 likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-29091391
See related
AllianceGenome:Xenbase:XB-GENE-29091391
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary
Predicted to act upstream of or within anatomical structure morphogenesis; animal organ development; and cell differentiation. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See zscan32l in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (2849362..2851547, complement)

Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 24 like Neighboring gene uncharacterized protein MGC146893 Neighboring gene zinc finger protein 3 Neighboring gene zinc finger protein 665

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030682.2 Chromosome 6 Reference UCB_Xtro_10.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within anatomical structure morphogenesis IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within animal organ development IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell differentiation IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
gastrula zinc finger protein XlCGF8.2DB-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    2849362..2851547 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012964272.3 → XP_012819726.1  gastrula zinc finger protein XlCGF8.2DB-like

    UniProtKB/TrEMBL
    A0A8J0SQ47
    Conserved Domains (2) summary
    COG5048
    Location:42 → 214
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:158 → 178
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_031904491.1 → XP_031760351.1  gastrula zinc finger protein XlCGF8.2DB-like

    UniProtKB/TrEMBL
    A0A8J0SQ47
    Conserved Domains (2) summary
    COG5048
    Location:42 → 214
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:158 → 178
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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