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LOC116366029 polyadenylate-binding protein 1A [ Oncorhynchus kisutch (coho salmon) ]

Gene ID: 116366029, updated on 14-Dec-2023

Summary

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Gene symbol
LOC116366029
Gene description
polyadenylate-binding protein 1A
See related
Ensembl:ENSOKIG00005038467
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus kisutch
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC116366029 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Okis_V2 (GCF_002021735.2) Unplaced Scaffold NW_022263286.1 (2216..8295)

NW_022263286.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD72 Neighboring gene ovarian cancer G-protein coupled receptor 1-like Neighboring gene E3 ubiquitin-protein ligase RNF19A pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022263286 Unplaced Scaffold Reference Okis_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus kisutch Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Okis_V2 Primary Assembly

Genomic

  1. NW_022263286.1 Reference Okis_V2 Primary Assembly

    Range
    2216..8295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031818334.1 → XP_031674194.1  polyadenylate-binding protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A8C7GLL6, A0A8C7JLS4
    Conserved Domains (1) summary
    TIGR01628
    Location:11 → 613
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family

  2. XM_031818335.1 → XP_031674195.1  polyadenylate-binding protein 1A isoform X2

    UniProtKB/TrEMBL
    A0A8C7JLS4
    Related
    ENSOKIP00005088389.1, ENSOKIT00005094484.1
    Conserved Domains (1) summary
    TIGR01628
    Location:11 → 611
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
Nucleotide Protein
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